Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 KRT18P68-201ENST00000392293 1000 ntBASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 RARRES2P4-201ENST00000514074 484 ntBASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV27A0A0K0K1C4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRBV27A0A0K0K1C4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 WIZP1-201ENST00000531444 2299 ntBASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.75□□□□□ -0.21
TRBV27A0A0K0K1C4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 AC018553.1-201ENST00000616682 1458 ntBASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV27A0A0K0K1C4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms