Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 MYCNOS-205ENST00000641950 531 ntBASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV13-1A0A0B4J241 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV13-1A0A0B4J241 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 FER1L4-210ENST00000615531 5998 ntBASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 AC093503.3-201ENST00000624917 2352 ntBASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV13-1A0A0B4J241 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV13-1A0A0B4J241 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms