Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 AL031598.1-201ENST00000561511 1773 ntBASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV20-1A0A075B6N2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 PCDHA12-202ENST00000613593 2588 ntBASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRBV20-1A0A075B6N2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRBV20-1A0A075B6N2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRBV20-1A0A075B6N2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms