Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 uc_338.22-201ENST00000622722 187 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SND1-IT1-201ENST00000623342 2481 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 AC092725.2-201ENST00000567658 1389 ntBASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL25A1Q9BXS0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC011447.7-201ENST00000624228 1590 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL136146.1-201ENST00000529830 1667 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC008937.3-201ENST00000606813 1700 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 RN7SKP44-201ENST00000363602 316 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL645927.1-201ENST00000396783 406 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 RNU6-1148P-201ENST00000410992 104 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 UQCRHP1-204ENST00000424609 274 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 RPL23AP50-201ENST00000434149 455 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL645936.1-201ENST00000441979 518 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC135721.2-201ENST00000464237 300 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC083798.1-201ENST00000472671 131 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC006499.3-201ENST00000506077 748 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 HMGB3P15-201ENST00000507326 574 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 RN7SKP256-201ENST00000517201 314 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 RPL21P5-201ENST00000554662 472 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 MIR3682-201ENST00000581338 84 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 NRBF2P1-201ENST00000587407 859 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC125494.2-201ENST00000602431 657 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AL596327.1-201ENST00000603629 213 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AC018462.2-201ENST00000605375 395 ntBASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL25A1Q9BXS0 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 TRIM53BP-201ENST00000532912 1720 ntBASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC6.9□□□□□ -1.3
COL25A1Q9BXS0 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms