RNA–Protein interactions for RNA: ENST00000390455.3

TRAV26-1-201, Transcript of T cell receptor alpha variable 26-1, humanhuman

APPRIS P1 BASIC

Gene TRAV26-1, Length 537 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1-201ENST00000390455 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
TRAV26-1-201ENST00000390455 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
TRAV26-1-201ENST00000390455 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
TRAV26-1-201ENST00000390455 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
TRAV26-1-201ENST00000390455 FOXD1Q16676 465 aa16.22■□□□□ 0.19
TRAV26-1-201ENST00000390455 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
TRAV26-1-201ENST00000390455 MSH5O43196 834 aa15.24■□□□□ 0.03
TRAV26-1-201ENST00000390455 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
TRAV26-1-201ENST00000390455 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
TRAV26-1-201ENST00000390455 ADRA2BP18089 450 aa15.17■□□□□ 0.02
TRAV26-1-201ENST00000390455 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
TRAV26-1-201ENST00000390455 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
TRAV26-1-201ENST00000390455 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
TRAV26-1-201ENST00000390455 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
TRAV26-1-201ENST00000390455 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
TRAV26-1-201ENST00000390455 CNKSR2Q8WXI2 1034 aa13.49□□□□□ -0.25
TRAV26-1-201ENST00000390455 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
TRAV26-1-201ENST00000390455 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
TRAV26-1-201ENST00000390455 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
TRAV26-1-201ENST00000390455 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
TRAV26-1-201ENST00000390455 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
TRAV26-1-201ENST00000390455 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
TRAV26-1-201ENST00000390455 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
TRAV26-1-201ENST00000390455 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
TRAV26-1-201ENST00000390455 KCNA4P22459 653 aa12.84□□□□□ -0.35
TRAV26-1-201ENST00000390455 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
TRAV26-1-201ENST00000390455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAV26-1-201ENST00000390455 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
TRAV26-1-201ENST00000390455 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
TRAV26-1-201ENST00000390455 APLP2Q06481 763 aa12.29□□□□□ -0.44
TRAV26-1-201ENST00000390455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
TRAV26-1-201ENST00000390455 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
TRAV26-1-201ENST00000390455 CAPN15O75808 1086 aa12.25□□□□□ -0.45
TRAV26-1-201ENST00000390455 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
TRAV26-1-201ENST00000390455 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
TRAV26-1-201ENST00000390455 SLC4A1APQ9BWU0 796 aaKnown RBP12.19□□□□□ -0.46
TRAV26-1-201ENST00000390455 DSG3P32926 999 aa12.15□□□□□ -0.46
TRAV26-1-201ENST00000390455 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
TRAV26-1-201ENST00000390455 MYCNP04198 464 aaPredicted RBP12.1□□□□□ -0.47
TRAV26-1-201ENST00000390455 TRHP20396 242 aaPredicted RBP12.07□□□□□ -0.48
TRAV26-1-201ENST00000390455 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
TRAV26-1-201ENST00000390455 ABCB7O75027 752 aa11.94□□□□□ -0.5
TRAV26-1-201ENST00000390455 POTEHQ6S545 545 aa11.81□□□□□ -0.52
TRAV26-1-201ENST00000390455 POLA2Q14181 598 aa11.79□□□□□ -0.52
TRAV26-1-201ENST00000390455 ZBTB22O15209 634 aa11.77□□□□□ -0.53
TRAV26-1-201ENST00000390455 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
TRAV26-1-201ENST00000390455 ATXN8OSP0DMR3 200 aa11.69□□□□□ -0.54
TRAV26-1-201ENST00000390455 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
TRAV26-1-201ENST00000390455 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
TRAV26-1-201ENST00000390455 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
TRAV26-1-201ENST00000390455 FBLN2P98095 1184 aa11.38□□□□□ -0.59
TRAV26-1-201ENST00000390455 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
TRAV26-1-201ENST00000390455 CSRNP3Q8WYN3 585 aa11.35□□□□□ -0.59
TRAV26-1-201ENST00000390455 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
TRAV26-1-201ENST00000390455 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
TRAV26-1-201ENST00000390455 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
TRAV26-1-201ENST00000390455 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
TRAV26-1-201ENST00000390455 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
TRAV26-1-201ENST00000390455 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
TRAV26-1-201ENST00000390455 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
TRAV26-1-201ENST00000390455 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
TRAV26-1-201ENST00000390455 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
TRAV26-1-201ENST00000390455 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
TRAV26-1-201ENST00000390455 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
TRAV26-1-201ENST00000390455 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
TRAV26-1-201ENST00000390455 FXR2P51116 673 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAV26-1-201ENST00000390455 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
TRAV26-1-201ENST00000390455 CLEC11AQ9Y240 323 aa10.95□□□□□ -0.66
TRAV26-1-201ENST00000390455 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAV26-1-201ENST00000390455 HAX1O00165 279 aa10.85□□□□□ -0.67
TRAV26-1-201ENST00000390455 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
TRAV26-1-201ENST00000390455 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
TRAV26-1-201ENST00000390455 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
TRAV26-1-201ENST00000390455 STAG3Q9UJ98 1225 aa10.74□□□□□ -0.69
TRAV26-1-201ENST00000390455 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
TRAV26-1-201ENST00000390455 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
TRAV26-1-201ENST00000390455 EVX2Q03828 476 aa10.64□□□□□ -0.71
TRAV26-1-201ENST00000390455 FARP1Q9Y4F1 1045 aaPredicted RBP10.61□□□□□ -0.71
TRAV26-1-201ENST00000390455 PROM2Q8N271 834 aa10.53□□□□□ -0.72
TRAV26-1-201ENST00000390455 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
TRAV26-1-201ENST00000390455 CD44P16070 742 aaKnown RBP10.52□□□□□ -0.73
TRAV26-1-201ENST00000390455 CLCN6P51797 869 aa10.48□□□□□ -0.73
TRAV26-1-201ENST00000390455 GABBR2O75899 941 aa10.47□□□□□ -0.73
TRAV26-1-201ENST00000390455 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAV26-1-201ENST00000390455 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
TRAV26-1-201ENST00000390455 ZNF579Q8NAF0 562 aaKnown RBP10.38□□□□□ -0.75
TRAV26-1-201ENST00000390455 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
TRAV26-1-201ENST00000390455 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
TRAV26-1-201ENST00000390455 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
TRAV26-1-201ENST00000390455 FKBP8Q14318 412 aa10.3□□□□□ -0.76
TRAV26-1-201ENST00000390455 MIER1Q8N108 512 aa10.28□□□□□ -0.76
TRAV26-1-201ENST00000390455 LHX8Q68G74 356 aa10.27□□□□□ -0.77
TRAV26-1-201ENST00000390455 DCBLD2Q96PD2 775 aa10.25□□□□□ -0.77
TRAV26-1-201ENST00000390455 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
TRAV26-1-201ENST00000390455 ZBTB47Q9UFB7 747 aaPredicted RBP10.21□□□□□ -0.77
TRAV26-1-201ENST00000390455 POTEIP0CG38 1075 aa10.2□□□□□ -0.78
TRAV26-1-201ENST00000390455 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
TRAV26-1-201ENST00000390455 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
TRAV26-1-201ENST00000390455 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
TRAV26-1-201ENST00000390455 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms