RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
AC078880.2-201ENST00000547948 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
AC078880.2-201ENST00000547948 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
AC078880.2-201ENST00000547948 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
AC078880.2-201ENST00000547948 FOXD1Q16676 465 aa16.65■□□□□ 0.26
AC078880.2-201ENST00000547948 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
AC078880.2-201ENST00000547948 MSH5O43196 834 aa15.66■□□□□ 0.1
AC078880.2-201ENST00000547948 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
AC078880.2-201ENST00000547948 PIAS4Q8N2W9 510 aaPredicted RBP15.53■□□□□ 0.08
AC078880.2-201ENST00000547948 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
AC078880.2-201ENST00000547948 ADRA2BP18089 450 aa15.37■□□□□ 0.05
AC078880.2-201ENST00000547948 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
AC078880.2-201ENST00000547948 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
AC078880.2-201ENST00000547948 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
AC078880.2-201ENST00000547948 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
AC078880.2-201ENST00000547948 CACNB1Q02641 598 aaPredicted RBP13.66□□□□□ -0.22
AC078880.2-201ENST00000547948 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
AC078880.2-201ENST00000547948 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
AC078880.2-201ENST00000547948 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
AC078880.2-201ENST00000547948 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
AC078880.2-201ENST00000547948 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
AC078880.2-201ENST00000547948 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
AC078880.2-201ENST00000547948 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
AC078880.2-201ENST00000547948 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
AC078880.2-201ENST00000547948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.93□□□□□ -0.34
AC078880.2-201ENST00000547948 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
AC078880.2-201ENST00000547948 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
AC078880.2-201ENST00000547948 CAPN15O75808 1086 aa12.51□□□□□ -0.41
AC078880.2-201ENST00000547948 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
AC078880.2-201ENST00000547948 DSG3P32926 999 aa12.42□□□□□ -0.42
AC078880.2-201ENST00000547948 KCNA4P22459 653 aa12.38□□□□□ -0.43
AC078880.2-201ENST00000547948 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
AC078880.2-201ENST00000547948 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
AC078880.2-201ENST00000547948 POTEHQ6S545 545 aa12.27□□□□□ -0.45
AC078880.2-201ENST00000547948 APLP2Q06481 763 aa12.21□□□□□ -0.45
AC078880.2-201ENST00000547948 ABCB7O75027 752 aa12.19□□□□□ -0.46
AC078880.2-201ENST00000547948 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
AC078880.2-201ENST00000547948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
AC078880.2-201ENST00000547948 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
AC078880.2-201ENST00000547948 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
AC078880.2-201ENST00000547948 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
AC078880.2-201ENST00000547948 POLA2Q14181 598 aa11.86□□□□□ -0.51
AC078880.2-201ENST00000547948 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
AC078880.2-201ENST00000547948 CHRDL2Q6WN34 429 aa11.71□□□□□ -0.53
AC078880.2-201ENST00000547948 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
AC078880.2-201ENST00000547948 ATF5Q9Y2D1 282 aaPredicted RBP11.61□□□□□ -0.55
AC078880.2-201ENST00000547948 FOXD4L1Q9NU39 408 aa11.6□□□□□ -0.55
AC078880.2-201ENST00000547948 AKT1S1Q96B36 256 aa11.55□□□□□ -0.56
AC078880.2-201ENST00000547948 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
AC078880.2-201ENST00000547948 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
AC078880.2-201ENST00000547948 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
AC078880.2-201ENST00000547948 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
AC078880.2-201ENST00000547948 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
AC078880.2-201ENST00000547948 ZBTB22O15209 634 aa11.34□□□□□ -0.59
AC078880.2-201ENST00000547948 PITPNM1O00562 1244 aa11.32□□□□□ -0.6
AC078880.2-201ENST00000547948 HAX1O00165 279 aa11.31□□□□□ -0.6
AC078880.2-201ENST00000547948 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
AC078880.2-201ENST00000547948 NISCHQ9Y2I1 1504 aa11.25□□□□□ -0.61
AC078880.2-201ENST00000547948 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
AC078880.2-201ENST00000547948 FBLN2P98095 1184 aa11.22□□□□□ -0.61
AC078880.2-201ENST00000547948 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
AC078880.2-201ENST00000547948 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
AC078880.2-201ENST00000547948 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
AC078880.2-201ENST00000547948 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
AC078880.2-201ENST00000547948 EVX2Q03828 476 aa11.09□□□□□ -0.63
AC078880.2-201ENST00000547948 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
AC078880.2-201ENST00000547948 PRKAR2AP13861 404 aaKnown RBP11.06□□□□□ -0.64
AC078880.2-201ENST00000547948 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
AC078880.2-201ENST00000547948 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
AC078880.2-201ENST00000547948 SSUH2Q9Y2M2 353 aa10.96□□□□□ -0.65
AC078880.2-201ENST00000547948 C19orf67A6NJJ6 358 aa10.9□□□□□ -0.66
AC078880.2-201ENST00000547948 CHADLQ6NUI6 762 aa10.9□□□□□ -0.66
AC078880.2-201ENST00000547948 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
AC078880.2-201ENST00000547948 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
AC078880.2-201ENST00000547948 GABBR2O75899 941 aa10.83□□□□□ -0.68
AC078880.2-201ENST00000547948 LHX8Q68G74 356 aa10.71□□□□□ -0.69
AC078880.2-201ENST00000547948 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
AC078880.2-201ENST00000547948 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
AC078880.2-201ENST00000547948 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
AC078880.2-201ENST00000547948 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
AC078880.2-201ENST00000547948 CLCN6P51797 869 aa10.55□□□□□ -0.72
AC078880.2-201ENST00000547948 DCBLD2Q96PD2 775 aa10.54□□□□□ -0.72
AC078880.2-201ENST00000547948 ZRANB1Q9UGI0 708 aa10.53□□□□□ -0.72
AC078880.2-201ENST00000547948 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
AC078880.2-201ENST00000547948 CREBZFQ9NS37 354 aa10.5□□□□□ -0.73
AC078880.2-201ENST00000547948 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
AC078880.2-201ENST00000547948 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.73
AC078880.2-201ENST00000547948 EHMT2Q96KQ7 1210 aa10.44□□□□□ -0.74
AC078880.2-201ENST00000547948 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
AC078880.2-201ENST00000547948 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
AC078880.2-201ENST00000547948 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
AC078880.2-201ENST00000547948 PHF12Q96QT6 1004 aa10.34□□□□□ -0.75
AC078880.2-201ENST00000547948 PLSCR2Q9NRY7 297 aa10.27□□□□□ -0.77
AC078880.2-201ENST00000547948 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
AC078880.2-201ENST00000547948 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
AC078880.2-201ENST00000547948 POTEB2H3BUK9 544 aa10.23□□□□□ -0.77
AC078880.2-201ENST00000547948 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.77
AC078880.2-201ENST00000547948 TSPYL2Q9H2G4 693 aaPredicted RBP10.18□□□□□ -0.78
AC078880.2-201ENST00000547948 MS4A3Q96HJ5 214 aa10.17□□□□□ -0.78
AC078880.2-201ENST00000547948 ATMINO43313 823 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms