Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AC005858.4-201ENST00000623191 700 ntBASIC6.31□□□□□ -1.4
ALX3O95076 AL049541.2-201ENST00000626377 555 ntBASIC6.31□□□□□ -1.4
ALX3O95076 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ALX3O95076 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 ICE2P1-201ENST00000512800 1849 ntBASIC6.31□□□□□ -1.4
ALX3O95076 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.31□□□□□ -1.4
ALX3O95076 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.31□□□□□ -1.4
ALX3O95076 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ALX3O95076 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.3□□□□□ -1.4
ALX3O95076 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 AC107982.1-201ENST00000507171 1300 ntBASIC6.3□□□□□ -1.4
ALX3O95076 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 AL356361.1-201ENST00000400943 1459 ntBASIC6.3□□□□□ -1.4
ALX3O95076 SF3A3P1-201ENST00000446317 1477 ntBASIC6.3□□□□□ -1.4
ALX3O95076 CDR1-202ENST00000625883 1485 ntBASIC6.3□□□□□ -1.4
ALX3O95076 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 TMSB4XP2-201ENST00000335179 210 ntBASIC6.3□□□□□ -1.4
ALX3O95076 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 Y_RNA.202-201ENST00000364083 110 ntBASIC6.3□□□□□ -1.4
ALX3O95076 RNU6-1322P-201ENST00000364309 107 ntBASIC6.3□□□□□ -1.4
ALX3O95076 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ALX3O95076 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.3□□□□□ -1.4
ALX3O95076 KRT18P52-201ENST00000404956 846 ntBASIC6.3□□□□□ -1.4
ALX3O95076 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AC099535.1-201ENST00000408928 371 ntBASIC6.3□□□□□ -1.4
ALX3O95076 RN7SKP117-201ENST00000410175 264 ntBASIC6.3□□□□□ -1.4
ALX3O95076 Y_RNA.608-201ENST00000410647 95 ntBASIC6.3□□□□□ -1.4
ALX3O95076 OR9R1P-201ENST00000412200 877 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 CYP4F32P-201ENST00000426492 504 ntBASIC6.3□□□□□ -1.4
ALX3O95076 MTCO3P21-201ENST00000430791 643 ntBASIC6.3□□□□□ -1.4
ALX3O95076 HMGB3P12-201ENST00000438745 556 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 AC023274.2-201ENST00000445264 521 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AL022237.1-201ENST00000446663 358 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 AL606490.1-201ENST00000452266 765 ntBASIC6.3□□□□□ -1.4
ALX3O95076 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.3□□□□□ -1.4
ALX3O95076 OR9A1P-202ENST00000484361 945 ntBASIC6.3□□□□□ -1.4
ALX3O95076 CR383656.1-201ENST00000484916 377 ntBASIC6.3□□□□□ -1.4
ALX3O95076 RN7SL612P-201ENST00000497704 295 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 IGLV10-67-201ENST00000519446 325 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AP003467.2-201ENST00000520175 319 ntBASIC6.3□□□□□ -1.4
ALX3O95076 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.3□□□□□ -1.4
ALX3O95076 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.3□□□□□ -1.4
ALX3O95076 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.3□□□□□ -1.4
ALX3O95076 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 AC068802.1-201ENST00000603420 732 ntBASIC6.3□□□□□ -1.4
ALX3O95076 SNRPGP17-201ENST00000603780 214 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AC010680.4-201ENST00000605334 543 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.3□□□□□ -1.4
ALX3O95076 AC090971.5-201ENST00000621102 293 ntBASIC6.3□□□□□ -1.4
ALX3O95076 AL683826.1-201ENST00000624104 627 ntBASIC6.3□□□□□ -1.4
ALX3O95076 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 TPTEP1-208ENST00000636884 213 ntBASIC6.3□□□□□ -1.4
ALX3O95076 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.3□□□□□ -1.4
ALX3O95076 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 AC079949.2-201ENST00000617117 2933 ntBASIC6.3□□□□□ -1.4
ALX3O95076 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ALX3O95076 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ALX3O95076 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ALX3O95076 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ALX3O95076 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
ALX3O95076 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALX3O95076 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
ALX3O95076 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.29□□□□□ -1.4
ALX3O95076 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ALX3O95076 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.29□□□□□ -1.4
ALX3O95076 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ALX3O95076 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms