RNA–Protein interactions for RNA: ENST00000521034.1

LINC02055-204, Transcript of long intergenic non-protein coding RNA 2055, humanhuman

TSL 5 BASIC

Gene LINC02055, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02055-204ENST00000521034 AEBP2Q6ZN18 517 aaPredicted RBP23.03■■□□□ 1.28
LINC02055-204ENST00000521034 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
LINC02055-204ENST00000521034 SENP3Q9H4L4 574 aaPredicted RBP19.6■□□□□ 0.73
LINC02055-204ENST00000521034 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
LINC02055-204ENST00000521034 FOXD1Q16676 465 aa18.4■□□□□ 0.54
LINC02055-204ENST00000521034 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
LINC02055-204ENST00000521034 MSH5O43196 834 aa17.28■□□□□ 0.36
LINC02055-204ENST00000521034 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
LINC02055-204ENST00000521034 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
LINC02055-204ENST00000521034 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
LINC02055-204ENST00000521034 ADRA2BP18089 450 aa16.86■□□□□ 0.29
LINC02055-204ENST00000521034 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
LINC02055-204ENST00000521034 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
LINC02055-204ENST00000521034 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
LINC02055-204ENST00000521034 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
LINC02055-204ENST00000521034 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
LINC02055-204ENST00000521034 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
LINC02055-204ENST00000521034 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
LINC02055-204ENST00000521034 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
LINC02055-204ENST00000521034 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
LINC02055-204ENST00000521034 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
LINC02055-204ENST00000521034 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
LINC02055-204ENST00000521034 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
LINC02055-204ENST00000521034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
LINC02055-204ENST00000521034 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
LINC02055-204ENST00000521034 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
LINC02055-204ENST00000521034 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
LINC02055-204ENST00000521034 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
LINC02055-204ENST00000521034 POTEHQ6S545 545 aa13.72□□□□□ -0.21
LINC02055-204ENST00000521034 CAPN15O75808 1086 aa13.71□□□□□ -0.21
LINC02055-204ENST00000521034 DSG3P32926 999 aa13.7□□□□□ -0.22
LINC02055-204ENST00000521034 SLC4A2P04920 1241 aa13.42□□□□□ -0.26
LINC02055-204ENST00000521034 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
LINC02055-204ENST00000521034 ABCB7O75027 752 aa13.4□□□□□ -0.26
LINC02055-204ENST00000521034 KCNA4P22459 653 aa13.34□□□□□ -0.27
LINC02055-204ENST00000521034 ZNF219Q9P2Y4 722 aaPredicted RBP13.27□□□□□ -0.29
LINC02055-204ENST00000521034 APLP2Q06481 763 aa13.22□□□□□ -0.29
LINC02055-204ENST00000521034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
LINC02055-204ENST00000521034 HNRNPUL2Q1KMD3 747 aaKnown RBP13.14□□□□□ -0.31
LINC02055-204ENST00000521034 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
LINC02055-204ENST00000521034 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
LINC02055-204ENST00000521034 POLA2Q14181 598 aa12.94□□□□□ -0.34
LINC02055-204ENST00000521034 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
LINC02055-204ENST00000521034 MYCNP04198 464 aaPredicted RBP12.85□□□□□ -0.35
LINC02055-204ENST00000521034 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
LINC02055-204ENST00000521034 SP7Q8TDD2 431 aaPredicted RBP12.66□□□□□ -0.38
LINC02055-204ENST00000521034 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
LINC02055-204ENST00000521034 REM2Q8IYK8 340 aaPredicted RBP12.57□□□□□ -0.4
LINC02055-204ENST00000521034 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
LINC02055-204ENST00000521034 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
LINC02055-204ENST00000521034 ZBTB12Q9Y330 459 aaPredicted RBP12.53□□□□□ -0.4
LINC02055-204ENST00000521034 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
LINC02055-204ENST00000521034 SLC4A1APQ9BWU0 796 aaKnown RBP12.48□□□□□ -0.41
LINC02055-204ENST00000521034 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
LINC02055-204ENST00000521034 HAX1O00165 279 aa12.45□□□□□ -0.42
LINC02055-204ENST00000521034 FXR2P51116 673 aaKnown RBP eCLIP12.4□□□□□ -0.42
LINC02055-204ENST00000521034 EVX2Q03828 476 aa12.33□□□□□ -0.44
LINC02055-204ENST00000521034 ZBTB22O15209 634 aa12.28□□□□□ -0.44
LINC02055-204ENST00000521034 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
LINC02055-204ENST00000521034 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
LINC02055-204ENST00000521034 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
LINC02055-204ENST00000521034 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
LINC02055-204ENST00000521034 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
LINC02055-204ENST00000521034 FBLN2P98095 1184 aa12.11□□□□□ -0.47
LINC02055-204ENST00000521034 ATXN8OSP0DMR3 200 aa12.09□□□□□ -0.47
LINC02055-204ENST00000521034 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
LINC02055-204ENST00000521034 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
LINC02055-204ENST00000521034 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
LINC02055-204ENST00000521034 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
LINC02055-204ENST00000521034 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
LINC02055-204ENST00000521034 GABBR2O75899 941 aa11.97□□□□□ -0.49
LINC02055-204ENST00000521034 SSUH2Q9Y2M2 353 aa11.96□□□□□ -0.49
LINC02055-204ENST00000521034 LHX8Q68G74 356 aa11.89□□□□□ -0.51
LINC02055-204ENST00000521034 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
LINC02055-204ENST00000521034 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC02055-204ENST00000521034 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
LINC02055-204ENST00000521034 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
LINC02055-204ENST00000521034 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
LINC02055-204ENST00000521034 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
LINC02055-204ENST00000521034 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
LINC02055-204ENST00000521034 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
LINC02055-204ENST00000521034 CLCN6P51797 869 aa11.49□□□□□ -0.57
LINC02055-204ENST00000521034 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
LINC02055-204ENST00000521034 CREBZFQ9NS37 354 aa11.46□□□□□ -0.57
LINC02055-204ENST00000521034 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
LINC02055-204ENST00000521034 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
LINC02055-204ENST00000521034 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
LINC02055-204ENST00000521034 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
LINC02055-204ENST00000521034 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
LINC02055-204ENST00000521034 STAG3Q9UJ98 1225 aa11.32□□□□□ -0.6
LINC02055-204ENST00000521034 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
LINC02055-204ENST00000521034 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
LINC02055-204ENST00000521034 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
LINC02055-204ENST00000521034 POTEMA6NI47 508 aa11.23□□□□□ -0.61
LINC02055-204ENST00000521034 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
LINC02055-204ENST00000521034 POTEGQ6S5H5 508 aa11.18□□□□□ -0.62
LINC02055-204ENST00000521034 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC02055-204ENST00000521034 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
LINC02055-204ENST00000521034 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
LINC02055-204ENST00000521034 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms