Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 BTF3P13-201ENST00000513224 490 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AC106800.2-201ENST00000514009 1103 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AC112206.3-201ENST00000514578 389 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 RN7SKP11-201ENST00000517018 287 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 GLYATL1P4-201ENST00000529326 906 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.71□□□□□ -1.18
HOXA2O43364 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
HOXA2O43364 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.71□□□□□ -1.18
HOXA2O43364 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.71□□□□□ -1.18
HOXA2O43364 AC011891.2-201ENST00000604949 397 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.71□□□□□ -1.18
HOXA2O43364 AC099667.1-201ENST00000624222 469 ntBASIC7.71□□□□□ -1.18
HOXA2O43364 TTK-211ENST00000627129 240 ntTSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.71□□□□□ -1.18
HOXA2O43364 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
HOXA2O43364 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
HOXA2O43364 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
HOXA2O43364 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HOXA2O43364 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.7□□□□□ -1.18
HOXA2O43364 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 AC145207.5-201ENST00000582866 2682 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 AC009948.5-201ENST00000624360 4406 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 AC090017.1-201ENST00000548612 1779 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HOXA2O43364 NACAP2-201ENST00000318548 624 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HOXA2O43364 IGKV7-3-201ENST00000357453 298 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 RNU6-1120P-201ENST00000362988 108 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.7□□□□□ -1.18
HOXA2O43364 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HOXA2O43364 RPS20P2-201ENST00000402520 389 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AL034374.1-201ENST00000406329 351 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 MIR1266-201ENST00000408125 84 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC099535.1-201ENST00000408928 371 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 RNU2-39P-201ENST00000410604 198 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.7□□□□□ -1.18
HOXA2O43364 RBMY2KP-201ENST00000418221 992 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 FAM183DP-201ENST00000421987 399 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 NUP35P1-201ENST00000422734 947 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 SETP9-201ENST00000423837 832 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 AL354714.5-201ENST00000450131 590 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC022080.2-201ENST00000452932 533 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 SNORA81.1-201ENST00000458922 177 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 RN7SL797P-201ENST00000486314 297 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 RN7SL569P-201ENST00000494652 288 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC114324.2-202ENST00000503812 134 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 GAPDHP56-201ENST00000506031 988 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 PCBP2P3-201ENST00000509726 843 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 SCARNA6-201ENST00000515982 265 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 HIGD1AP6-201ENST00000521833 279 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 DPPA3P2-201ENST00000553589 478 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC099489.2-201ENST00000574976 260 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 MIR5186-201ENST00000577504 120 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 MIR4742-201ENST00000581069 85 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 7SK.7-201ENST00000603504 247 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC090617.10-201ENST00000624308 134 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 AC009161.2-201ENST00000624626 138 ntBASIC7.7□□□□□ -1.18
HOXA2O43364 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.7□□□□□ -1.18
HOXA2O43364 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.7□□□□□ -1.18
HOXA2O43364 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HOXA2O43364 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
HOXA2O43364 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms