Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP4S1Q9Y587 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 BICD1-207ENST00000551848 1962 ntBASIC18.42■□□□□ 0.54
AP4S1Q9Y587 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 CDV3P1-201ENST00000471403 739 ntBASIC18.42■□□□□ 0.54
AP4S1Q9Y587 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP4S1Q9Y587 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 AC087633.2-202ENST00000565166 1439 ntBASIC18.41■□□□□ 0.54
AP4S1Q9Y587 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 AL031598.1-201ENST00000561511 1773 ntBASIC18.41■□□□□ 0.54
AP4S1Q9Y587 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 AC097381.1-201ENST00000429019 1296 ntBASIC18.41■□□□□ 0.54
AP4S1Q9Y587 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 NOC2LP2-201ENST00000407594 1944 ntBASIC18.41■□□□□ 0.54
AP4S1Q9Y587 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
AP4S1Q9Y587 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 AC141586.3-201ENST00000562166 1838 ntBASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NOC2LP1-202ENST00000452600 2235 ntBASIC18.4■□□□□ 0.54
AP4S1Q9Y587 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 AL136116.3-201ENST00000402907 1138 ntBASIC18.4■□□□□ 0.54
AP4S1Q9Y587 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 CCDC92B-201ENST00000575506 885 ntBASIC18.4■□□□□ 0.54
AP4S1Q9Y587 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 AP000997.3-201ENST00000623333 2250 ntBASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP4S1Q9Y587 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.39■□□□□ 0.54
AP4S1Q9Y587 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AP4S1Q9Y587 AL354751.1-201ENST00000412768 1863 ntBASIC18.39■□□□□ 0.54
AP4S1Q9Y587 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms