Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SSX2IPQ9Y2D8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
SSX2IPQ9Y2D8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 CYP2D8P-201ENST00000433633 1490 ntBASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 HCG11-201ENST00000411553 5696 ntBASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 AP005242.2-201ENST00000580065 1175 ntBASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSX2IPQ9Y2D8 AC007225.1-201ENST00000566331 1836 ntBASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSX2IPQ9Y2D8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 ARMC10P1-201ENST00000313754 855 ntBASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 SLC25A3P1-201ENST00000443844 931 ntBASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 PHGDH-210ENST00000641115 1638 ntBASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.93■□□□□ 0.94
SSX2IPQ9Y2D8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 B3GAT3P1-201ENST00000471720 806 ntBASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 KRT18P35-201ENST00000510488 1269 ntBASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms