Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 AC006333.2-201ENST00000607957 2099 ntBASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SALL4Q9UJQ4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 AC105036.2-201ENST00000569468 176 ntBASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.72■□□□□ 0.91
SALL4Q9UJQ4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 AC073210.2-201ENST00000430369 194 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 KRT18P6-201ENST00000555540 1265 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 AL138781.1-201ENST00000566567 1274 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 TMEM191A-211ENST00000637163 1067 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 AC133041.1-202ENST00000642053 222 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 TFP1-202ENST00000475455 1573 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 AC104581.1-202ENST00000635932 2618 ntBASIC20.71■□□□□ 0.91
SALL4Q9UJQ4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SALL4Q9UJQ4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL4Q9UJQ4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 AC141586.3-201ENST00000562166 1838 ntBASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 AC069152.1-201ENST00000438030 544 ntBASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL4Q9UJQ4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 AC007613.1-201ENST00000572811 2597 ntBASIC20.68■□□□□ 0.9
SALL4Q9UJQ4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms