Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 HTR7P1-201ENST00000538670 1336 ntBASIC20.97■□□□□ 0.95
NXF1Q9UBU9 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.97■□□□□ 0.95
NXF1Q9UBU9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.97■□□□□ 0.95
NXF1Q9UBU9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 AC066615.1-201ENST00000640911 628 ntBASIC20.96■□□□□ 0.95
NXF1Q9UBU9 AP006294.2-201ENST00000641667 209 ntBASIC20.96■□□□□ 0.95
NXF1Q9UBU9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NXF1Q9UBU9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
NXF1Q9UBU9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NXF1Q9UBU9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 AL158211.5-201ENST00000623583 2518 ntBASIC20.94■□□□□ 0.94
NXF1Q9UBU9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 AC008550.1-201ENST00000511500 884 ntBASIC20.94■□□□□ 0.94
NXF1Q9UBU9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 KRT8P8-201ENST00000434750 1448 ntBASIC20.94■□□□□ 0.94
NXF1Q9UBU9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NXF1Q9UBU9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.93■□□□□ 0.94
NXF1Q9UBU9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.93■□□□□ 0.94
NXF1Q9UBU9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms