Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 ESRRAP1-201ENST00000400596 1257 ntBASIC19.86■□□□□ 0.77
UBP1Q9NZI7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.86■□□□□ 0.77
UBP1Q9NZI7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UBP1Q9NZI7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
UBP1Q9NZI7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 Z82202.1-201ENST00000623446 1880 ntBASIC19.84■□□□□ 0.77
UBP1Q9NZI7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBP1Q9NZI7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 KRT17P3-201ENST00000420566 1262 ntBASIC19.83■□□□□ 0.77
UBP1Q9NZI7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBP1Q9NZI7 AC069544.1-201ENST00000609399 999 ntBASIC19.83■□□□□ 0.77
UBP1Q9NZI7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBP1Q9NZI7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 AC005332.7-201ENST00000614046 2005 ntBASIC19.82■□□□□ 0.76
UBP1Q9NZI7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.82■□□□□ 0.76
UBP1Q9NZI7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBP1Q9NZI7 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms