Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 AC008694.1-202ENST00000636953 945 ntBASIC19.27■□□□□ 0.68
MKS1Q9NXB0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MKS1Q9NXB0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MKS1Q9NXB0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
MKS1Q9NXB0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
MKS1Q9NXB0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 AC135050.7-201ENST00000624508 2218 ntBASIC19.26■□□□□ 0.67
MKS1Q9NXB0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MKS1Q9NXB0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 AC090164.3-201ENST00000610780 2143 ntBASIC19.25■□□□□ 0.67
MKS1Q9NXB0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MKS1Q9NXB0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 FP475955.4-201ENST00000623131 1990 ntBASIC19.24■□□□□ 0.67
MKS1Q9NXB0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 AL512625.2-201ENST00000417533 625 ntBASIC19.24■□□□□ 0.67
MKS1Q9NXB0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MKS1Q9NXB0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 GPX1P1-201ENST00000388829 606 ntBASIC19.23■□□□□ 0.67
MKS1Q9NXB0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 AC073210.2-201ENST00000430369 194 ntBASIC19.23■□□□□ 0.67
MKS1Q9NXB0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.23■□□□□ 0.67
MKS1Q9NXB0 WIZP1-201ENST00000531444 2299 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms