Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.16■□□□□ 0.5
RLIMQ9NVW2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 AC018553.1-201ENST00000616682 1458 ntBASIC18.15■□□□□ 0.5
RLIMQ9NVW2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 AC091874.3-201ENST00000512672 1195 ntBASIC18.15■□□□□ 0.5
RLIMQ9NVW2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RLIMQ9NVW2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RLIMQ9NVW2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RLIMQ9NVW2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.14■□□□□ 0.5
RLIMQ9NVW2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RLIMQ9NVW2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
RLIMQ9NVW2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RLIMQ9NVW2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.14■□□□□ 0.49
RLIMQ9NVW2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.49
RLIMQ9NVW2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 AC120498.9-201ENST00000339021 3867 ntBASIC18.13■□□□□ 0.49
RLIMQ9NVW2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 AC005829.2-201ENST00000571422 1056 ntBASIC18.13■□□□□ 0.49
RLIMQ9NVW2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.13■□□□□ 0.49
RLIMQ9NVW2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms