Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHB16Q9NRJ7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB16Q9NRJ7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 AC116562.4-201ENST00000641316 2276 ntBASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 PTBP1P-201ENST00000554374 1601 ntBASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 AL032819.2-201ENST00000624543 2162 ntBASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB16Q9NRJ7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB16Q9NRJ7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 AL589743.5-201ENST00000616611 1050 ntBASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 AC231657.2-201ENST00000624556 255 ntBASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB16Q9NRJ7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 AC068338.2-201ENST00000563278 1430 ntBASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 TREX1-205ENST00000625293 1783 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms