Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD248Q9HCU0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD248Q9HCU0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.44■□□□□ 0.86
CD248Q9HCU0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD248Q9HCU0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD248Q9HCU0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD248Q9HCU0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CD248Q9HCU0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.44■□□□□ 0.86
CD248Q9HCU0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CD248Q9HCU0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.44■□□□□ 0.86
CD248Q9HCU0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 AC110285.5-201ENST00000611501 352 ntBASIC20.43■□□□□ 0.86
CD248Q9HCU0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 AC027702.1-201ENST00000563810 1770 ntBASIC20.43■□□□□ 0.86
CD248Q9HCU0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CD248Q9HCU0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.43■□□□□ 0.86
CD248Q9HCU0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 KRASP1-201ENST00000407852 552 ntBASIC20.42■□□□□ 0.86
CD248Q9HCU0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 AL049637.2-201ENST00000641778 930 ntBASIC20.42■□□□□ 0.86
CD248Q9HCU0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CD248Q9HCU0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CD248Q9HCU0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 AL390719.1-204ENST00000412397 1219 ntBASIC20.41■□□□□ 0.86
CD248Q9HCU0 TSPY7P-201ENST00000431358 1114 ntBASIC20.41■□□□□ 0.86
CD248Q9HCU0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 KRT8P36-201ENST00000489121 1440 ntBASIC20.41■□□□□ 0.86
CD248Q9HCU0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
CD248Q9HCU0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CD248Q9HCU0 AC007613.1-201ENST00000572811 2597 ntBASIC20.41■□□□□ 0.86
CD248Q9HCU0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD248Q9HCU0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CD248Q9HCU0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms