Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VCX3BQ9H321 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VCX3BQ9H321 AL161938.1-201ENST00000569833 2180 ntBASIC18.57■□□□□ 0.56
VCX3BQ9H321 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3BQ9H321 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3BQ9H321 AC139713.2-201ENST00000641328 2723 ntBASIC18.56■□□□□ 0.56
VCX3BQ9H321 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3BQ9H321 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 AC245052.3-201ENST00000450182 901 ntBASIC18.56■□□□□ 0.56
VCX3BQ9H321 AC053503.5-201ENST00000601508 636 ntBASIC18.56■□□□□ 0.56
VCX3BQ9H321 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3BQ9H321 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3BQ9H321 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCX3BQ9H321 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.56■□□□□ 0.56
VCX3BQ9H321 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 Z98044.1-201ENST00000632503 1764 ntBASIC18.55■□□□□ 0.56
VCX3BQ9H321 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.55■□□□□ 0.56
VCX3BQ9H321 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCX3BQ9H321 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
VCX3BQ9H321 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCX3BQ9H321 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.53■□□□□ 0.56
VCX3BQ9H321 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCX3BQ9H321 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms