Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC026471.1-201ENST00000564629 3026 ntBASIC20.3■□□□□ 0.84
DDX47Q9H0S4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 DUX4L16-201ENST00000555130 1264 ntBASIC20.3■□□□□ 0.84
DDX47Q9H0S4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 AC018553.1-201ENST00000616682 1458 ntBASIC20.3■□□□□ 0.84
DDX47Q9H0S4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX47Q9H0S4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 AC137761.2-201ENST00000561729 223 ntBASIC20.29■□□□□ 0.84
DDX47Q9H0S4 C2orf69P4-201ENST00000565394 541 ntBASIC20.29■□□□□ 0.84
DDX47Q9H0S4 AC145350.3-201ENST00000569033 163 ntBASIC20.29■□□□□ 0.84
DDX47Q9H0S4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX47Q9H0S4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 AC009113.1-201ENST00000570267 2443 ntBASIC20.28■□□□□ 0.84
DDX47Q9H0S4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 AC141586.3-201ENST00000562166 1838 ntBASIC20.28■□□□□ 0.84
DDX47Q9H0S4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.28■□□□□ 0.84
DDX47Q9H0S4 AC034268.1-201ENST00000441047 882 ntBASIC20.28■□□□□ 0.84
DDX47Q9H0S4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX47Q9H0S4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX47Q9H0S4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms