Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 KRT18P38-201ENST00000449496 1282 ntBASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
UBE2OQ9C0C9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
UBE2OQ9C0C9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
UBE2OQ9C0C9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 AC096733.2-201ENST00000609937 1394 ntBASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 MIR3652-201ENST00000579335 131 ntBASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 KRT8P45-201ENST00000414328 1447 ntBASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.51■■□□□ 1.03
UBE2OQ9C0C9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 KRT17P6-201ENST00000453795 1220 ntBASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 AC111152.3-201ENST00000569699 673 ntBASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
UBE2OQ9C0C9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 AC004951.3-201ENST00000418645 1148 ntBASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 TSPY17P-201ENST00000450329 467 ntBASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 AC008040.2-201ENST00000461049 708 ntBASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2OQ9C0C9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 ZNF444P1-201ENST00000559497 298 ntBASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2OQ9C0C9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms