Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NKX6-2Q9C056 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 AL138724.1-201ENST00000606771 1088 ntBASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.78■□□□□ 0.12
NKX6-2Q9C056 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 AL356309.3-201ENST00000624132 1934 ntBASIC15.77■□□□□ 0.12
NKX6-2Q9C056 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 AC239859.2-201ENST00000444165 318 ntBASIC15.77■□□□□ 0.12
NKX6-2Q9C056 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX6-2Q9C056 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX6-2Q9C056 AC009237.3-201ENST00000393279 1427 ntBASIC15.77■□□□□ 0.11
NKX6-2Q9C056 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.76■□□□□ 0.11
NKX6-2Q9C056 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX6-2Q9C056 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 HES6-206ENST00000409574 738 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX6-2Q9C056 SRD5A1P1-201ENST00000442297 786 ntBASIC15.75■□□□□ 0.11
NKX6-2Q9C056 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms