Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 KRT18P68-201ENST00000392293 1000 ntBASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ISCU-212ENST00000547005 795 ntTSL 3 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 BRWD1-AS2-201ENST00000603064 1028 ntBASIC11.6□□□□□ -0.55
LIMD2Q9BT23 AC016405.3-201ENST00000607710 860 ntBASIC11.6□□□□□ -0.55
LIMD2Q9BT23 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LIMD2Q9BT23 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 ME3-201ENST00000323418 1068 ntTSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CYP2T3P-201ENST00000601990 817 ntBASIC11.59□□□□□ -0.55
LIMD2Q9BT23 AC005181.1-201ENST00000604782 1256 ntBASIC11.59□□□□□ -0.55
LIMD2Q9BT23 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 GOLGA2P11-201ENST00000562660 1621 ntBASIC11.59□□□□□ -0.55
LIMD2Q9BT23 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LIMD2Q9BT23 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LIMD2Q9BT23 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LIMD2Q9BT23 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LIMD2Q9BT23 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.58□□□□□ -0.55
LIMD2Q9BT23 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 AC098818.2-201ENST00000564925 2320 ntBASIC11.58□□□□□ -0.56
LIMD2Q9BT23 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LIMD2Q9BT23 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms