Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USB1Q9BQ65 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
USB1Q9BQ65 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 DPP3P2-201ENST00000416030 1696 ntBASIC17.36■□□□□ 0.37
USB1Q9BQ65 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 MIR4497-201ENST00000583208 89 ntBASIC17.36■□□□□ 0.37
USB1Q9BQ65 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USB1Q9BQ65 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USB1Q9BQ65 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 HCG11-201ENST00000411553 5696 ntBASIC17.35■□□□□ 0.37
USB1Q9BQ65 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USB1Q9BQ65 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USB1Q9BQ65 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 Z99916.2-201ENST00000604037 246 ntBASIC17.34■□□□□ 0.37
USB1Q9BQ65 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USB1Q9BQ65 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.34■□□□□ 0.37
USB1Q9BQ65 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.33■□□□□ 0.37
USB1Q9BQ65 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USB1Q9BQ65 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USB1Q9BQ65 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
USB1Q9BQ65 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms