Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN4Q96NY8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 AP003041.3-201ENST00000527151 707 ntBASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN4Q96NY8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.22■□□□□ 0.83
NECTIN4Q96NY8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 KRT18P38-201ENST00000449496 1282 ntBASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 ZNF444P1-201ENST00000559497 298 ntBASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 CKBP1-201ENST00000565489 1086 ntBASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 NEK4P2-201ENST00000580004 1012 ntBASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 EP400NL-214ENST00000641289 2402 ntBASIC20.21■□□□□ 0.83
NECTIN4Q96NY8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 AC092720.2-201ENST00000602388 1665 ntBASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN4Q96NY8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms