Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.07■□□□□ 0.8
IFT43Q96FT9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
IFT43Q96FT9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFT43Q96FT9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFT43Q96FT9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFT43Q96FT9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFT43Q96FT9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFT43Q96FT9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
IFT43Q96FT9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
IFT43Q96FT9 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.06■□□□□ 0.8
IFT43Q96FT9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 AL596275.1-201ENST00000423464 877 ntBASIC20.05■□□□□ 0.8
IFT43Q96FT9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 TMEM179-206ENST00000616017 1645 ntBASIC20.05■□□□□ 0.8
IFT43Q96FT9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.05■□□□□ 0.8
IFT43Q96FT9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
IFT43Q96FT9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.04■□□□□ 0.8
IFT43Q96FT9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
IFT43Q96FT9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
IFT43Q96FT9 AP001271.2-201ENST00000624018 1556 ntBASIC20.04■□□□□ 0.8
IFT43Q96FT9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFT43Q96FT9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFT43Q96FT9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFT43Q96FT9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFT43Q96FT9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
IFT43Q96FT9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IFT43Q96FT9 AC098818.2-201ENST00000564925 2320 ntBASIC20.03■□□□□ 0.8
IFT43Q96FT9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
IFT43Q96FT9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms