Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ZNF428Q96B54 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ZNF428Q96B54 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 AF186192.3-201ENST00000583427 947 ntBASIC25.11■■□□□ 1.61
ZNF428Q96B54 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.11■■□□□ 1.61
ZNF428Q96B54 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 KRT16P5-201ENST00000455284 522 ntBASIC25.1■■□□□ 1.61
ZNF428Q96B54 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ZNF428Q96B54 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.1■■□□□ 1.61
ZNF428Q96B54 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC25.09■■□□□ 1.61
ZNF428Q96B54 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 KRT18P21-201ENST00000515767 1272 ntBASIC25.09■■□□□ 1.61
ZNF428Q96B54 RARRES2P10-201ENST00000564312 460 ntBASIC25.09■■□□□ 1.61
ZNF428Q96B54 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.09■■□□□ 1.61
ZNF428Q96B54 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.09■■□□□ 1.61
ZNF428Q96B54 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
ZNF428Q96B54 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ZNF428Q96B54 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 AL158211.5-201ENST00000623583 2518 ntBASIC25.08■■□□□ 1.61
ZNF428Q96B54 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
ZNF428Q96B54 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ZNF428Q96B54 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
ZNF428Q96B54 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
ZNF428Q96B54 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
ZNF428Q96B54 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 PWWP2AP1-201ENST00000429776 2273 ntBASIC25.07■■□□□ 1.6
ZNF428Q96B54 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 FDX2-207ENST00000494368 584 ntTSL 4 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 AC133561.5-201ENST00000635547 218 ntBASIC25.07■■□□□ 1.6
ZNF428Q96B54 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ZNF428Q96B54 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC25.07■■□□□ 1.6
ZNF428Q96B54 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC25.06■■□□□ 1.6
ZNF428Q96B54 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms