Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TM9SF4Q92544 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TM9SF4Q92544 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 AL020996.1-203ENST00000536896 2307 ntBASIC18.4■□□□□ 0.54
TM9SF4Q92544 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 AC073195.1-201ENST00000607241 877 ntBASIC18.4■□□□□ 0.54
TM9SF4Q92544 AC097493.4-201ENST00000641197 219 ntBASIC18.4■□□□□ 0.54
TM9SF4Q92544 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TM9SF4Q92544 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TM9SF4Q92544 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.39■□□□□ 0.54
TM9SF4Q92544 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.39■□□□□ 0.54
TM9SF4Q92544 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.39■□□□□ 0.53
TM9SF4Q92544 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.39■□□□□ 0.53
TM9SF4Q92544 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TM9SF4Q92544 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 SMG8-203ENST00000578922 2178 ntBASIC18.38■□□□□ 0.53
TM9SF4Q92544 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 MMP23A-201ENST00000234610 1017 ntBASIC18.38■□□□□ 0.53
TM9SF4Q92544 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 AP002982.1-201ENST00000492365 877 ntBASIC18.38■□□□□ 0.53
TM9SF4Q92544 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TM9SF4Q92544 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TM9SF4Q92544 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms