Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB40AQ8WXH6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 AC069152.1-201ENST00000438030 544 ntBASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 AC026471.1-201ENST00000564629 3026 ntBASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 AC079598.2-202ENST00000546624 1451 ntBASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB40AQ8WXH6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 AC007322.3-201ENST00000426526 701 ntBASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 AC010980.2-201ENST00000587099 1412 ntBASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB40AQ8WXH6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 BX276092.2-201ENST00000417668 665 ntBASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RAB40AQ8WXH6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 AC005082.1-201ENST00000413042 2259 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms