Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 KRT16P2-201ENST00000414673 1423 ntBASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
SMIM11BQ8TCY0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 MIR3621-201ENST00000580529 85 ntBASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM11BQ8TCY0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 FAM21FP-204ENST00000608637 956 ntBASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 AL031598.1-201ENST00000561511 1773 ntBASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SMIM11BQ8TCY0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms