Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDND2Q8NHS1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDND2Q8NHS1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CLDND2Q8NHS1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
CLDND2Q8NHS1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 BX088651.1-201ENST00000540551 451 ntBASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDND2Q8NHS1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 DPP3P2-201ENST00000416030 1696 ntBASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 ECEL1P3-201ENST00000427961 737 ntBASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 AF186192.3-201ENST00000583427 947 ntBASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 AC004264.1-201ENST00000608354 794 ntBASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDND2Q8NHS1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 AL353807.1-201ENST00000427475 662 ntBASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDND2Q8NHS1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 AC007225.1-201ENST00000566331 1836 ntBASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 AC098818.2-201ENST00000564925 2320 ntBASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 AC211429.1-201ENST00000415277 523 ntBASIC16.55■□□□□ 0.24
CLDND2Q8NHS1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms