Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL22A1Q8NFW1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 NME1-207ENST00000480143 964 ntTSL 2 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 AC092597.1-201ENST00000487352 616 ntBASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 BMF-207ENST00000559701 630 ntTSL 3 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL22A1Q8NFW1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 NUS1P1-201ENST00000446295 882 ntBASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 AP002414.4-201ENST00000589764 1148 ntBASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL22A1Q8NFW1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 CHCHD2P8-201ENST00000429873 447 ntBASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 AP002469.2-201ENST00000531724 424 ntBASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 AL024507.2-201ENST00000606070 2574 ntBASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL22A1Q8NFW1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 ECEL1P1-201ENST00000373592 1742 ntBASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 KRT8P11-201ENST00000409686 1436 ntBASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC26.14■■□□□ 1.78
COL22A1Q8NFW1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 GXYLT1P4-201ENST00000613576 1192 ntBASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
COL22A1Q8NFW1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
COL22A1Q8NFW1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
COL22A1Q8NFW1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms