Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 LINC01465-201ENST00000408887 1940 ntBASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 AP005242.2-201ENST00000580065 1175 ntBASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 KRT18P22-201ENST00000402024 1347 ntBASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 AC099778.1-201ENST00000568593 1911 ntBASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC38A9Q8NBW4 LINC01006-201ENST00000333319 2292 ntBASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 CRYGFP-201ENST00000418459 633 ntBASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 Z85996.1-201ENST00000494644 937 ntBASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 AP000692.2-201ENST00000608391 879 ntBASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 AC011298.2-201ENST00000617989 482 ntBASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 AC092865.7-201ENST00000641832 219 ntBASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.4■□□□□ 0.54
SLC38A9Q8NBW4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 AC113347.1-201ENST00000413321 391 ntBASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
SLC38A9Q8NBW4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 AC009237.14-201ENST00000609975 1594 ntBASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 AC004951.3-201ENST00000418645 1148 ntBASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 AC073508.3-201ENST00000619697 1419 ntBASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC38A9Q8NBW4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 TERF1P1-201ENST00000311003 1181 ntBASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 INGX-201ENST00000359239 846 ntBASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 KRT18P57-201ENST00000443599 1254 ntBASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 SLC25A3P1-201ENST00000443844 931 ntBASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 AC091390.4-202ENST00000476426 537 ntBASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC38A9Q8NBW4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms