Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 PHGDH-210ENST00000641115 1638 ntBASIC20.02■□□□□ 0.8
PAF1Q8N7H5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 AC142381.4-202ENST00000563973 229 ntBASIC20.02■□□□□ 0.8
PAF1Q8N7H5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 AL023875.1-201ENST00000640777 796 ntBASIC20.02■□□□□ 0.8
PAF1Q8N7H5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PAF1Q8N7H5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.02■□□□□ 0.79
PAF1Q8N7H5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.01■□□□□ 0.79
PAF1Q8N7H5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PAF1Q8N7H5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20■□□□□ 0.79
PAF1Q8N7H5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 AC112907.3-201ENST00000577781 2400 ntBASIC20■□□□□ 0.79
PAF1Q8N7H5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20■□□□□ 0.79
PAF1Q8N7H5 PRORSD1P-201ENST00000295112 541 ntBASIC20■□□□□ 0.79
PAF1Q8N7H5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20■□□□□ 0.79
PAF1Q8N7H5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20■□□□□ 0.79
PAF1Q8N7H5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
PAF1Q8N7H5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20■□□□□ 0.79
PAF1Q8N7H5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20■□□□□ 0.79
PAF1Q8N7H5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20■□□□□ 0.79
PAF1Q8N7H5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20■□□□□ 0.79
PAF1Q8N7H5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20■□□□□ 0.79
PAF1Q8N7H5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PAF1Q8N7H5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PAF1Q8N7H5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20■□□□□ 0.79
PAF1Q8N7H5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.99■□□□□ 0.79
PAF1Q8N7H5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 KRASP1-201ENST00000407852 552 ntBASIC19.99■□□□□ 0.79
PAF1Q8N7H5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 AL121829.2-201ENST00000620908 328 ntBASIC19.99■□□□□ 0.79
PAF1Q8N7H5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PAF1Q8N7H5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms