Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.05■□□□□ 0.48
C9orf40Q8IXQ3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 AC073195.1-201ENST00000607241 877 ntBASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 AP001412.1-201ENST00000608405 714 ntBASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
C9orf40Q8IXQ3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 SNORA78-201ENST00000459373 127 ntBASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
C9orf40Q8IXQ3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 FAM197Y1-201ENST00000421178 764 ntBASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 AL596275.1-201ENST00000423464 877 ntBASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 KSR1P1-201ENST00000446298 240 ntBASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 CD177P1-201ENST00000606252 935 ntBASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 AL445675.2-201ENST00000620291 557 ntBASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.02■□□□□ 0.48
C9orf40Q8IXQ3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.02■□□□□ 0.47
C9orf40Q8IXQ3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.02■□□□□ 0.47
C9orf40Q8IXQ3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
C9orf40Q8IXQ3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
C9orf40Q8IXQ3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.02■□□□□ 0.47
C9orf40Q8IXQ3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TSPY7P-201ENST00000431358 1114 ntBASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 CR392000.1-201ENST00000624770 1228 ntBASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
C9orf40Q8IXQ3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms