Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 C1QBPP2-201ENST00000528754 825 ntBASIC18.26■□□□□ 0.51
CCDC71Q8IV32 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 SOX15-203ENST00000570788 1093 ntBASIC18.26■□□□□ 0.51
CCDC71Q8IV32 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 FAM197Y4-202ENST00000622692 608 ntBASIC18.26■□□□□ 0.51
CCDC71Q8IV32 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 CYP21A1P-202ENST00000354927 1481 ntBASIC18.26■□□□□ 0.51
CCDC71Q8IV32 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC71Q8IV32 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 UBE2SP1-201ENST00000450587 669 ntBASIC18.25■□□□□ 0.51
CCDC71Q8IV32 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC71Q8IV32 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 KRT17P3-201ENST00000420566 1262 ntBASIC18.24■□□□□ 0.51
CCDC71Q8IV32 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 RPPH1-201ENST00000516869 333 ntBASIC18.24■□□□□ 0.51
CCDC71Q8IV32 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 AC233263.1-201ENST00000578059 224 ntBASIC18.24■□□□□ 0.51
CCDC71Q8IV32 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC71Q8IV32 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.23■□□□□ 0.51
CCDC71Q8IV32 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms