Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 AC006015.1-201ENST00000429970 570 ntBASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 PTBP1P-201ENST00000554374 1601 ntBASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCHD4Q6ZW05 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCHD4Q6ZW05 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 MCRIP2P1-201ENST00000394346 511 ntBASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 AC100791.3-201ENST00000617619 330 ntBASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTCHD4Q6ZW05 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTCHD4Q6ZW05 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTCHD4Q6ZW05 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PTCHD4Q6ZW05 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTCHD4Q6ZW05 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTCHD4Q6ZW05 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
PTCHD4Q6ZW05 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.89■□□□□ 0.45
PTCHD4Q6ZW05 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms