Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXR1Q6PIV2 CROCCP3-202ENST00000420820 1947 ntBASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 AC008175.2-201ENST00000612840 297 ntBASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXR1Q6PIV2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 RARRES2P4-201ENST00000514074 484 ntBASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXR1Q6PIV2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 PRORSD1P-201ENST00000295112 541 ntBASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 AL691432.2-201ENST00000607222 2038 ntBASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXR1Q6PIV2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 AC068880.1-201ENST00000507289 2297 ntBASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXR1Q6PIV2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms