Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 AC010980.2-201ENST00000587099 1412 ntBASIC17.81■□□□□ 0.44
TMEM53Q6P2H8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 KRT18P68-201ENST00000392293 1000 ntBASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 AC090192.1-201ENST00000517740 490 ntBASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 CYP2T3P-201ENST00000601990 817 ntBASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 MKRN4P-201ENST00000444706 1521 ntBASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM53Q6P2H8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 SLC29A4P1-201ENST00000398760 971 ntBASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 AC093787.1-201ENST00000450396 207 ntBASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 AC083906.2-201ENST00000511578 360 ntBASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 KRT8P36-201ENST00000489121 1440 ntBASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEM53Q6P2H8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 GPX1P1-201ENST00000388829 606 ntBASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 AL589743.5-201ENST00000616611 1050 ntBASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM53Q6P2H8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms