Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 TMEM179-206ENST00000616017 1645 ntBASIC18.6■□□□□ 0.57
PRAMEF17Q5VTA0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 MIR1238-201ENST00000408483 83 ntBASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PRAMEF17Q5VTA0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF17Q5VTA0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF17Q5VTA0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PRAMEF17Q5VTA0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF17Q5VTA0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF17Q5VTA0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PRAMEF17Q5VTA0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 AC116562.2-201ENST00000507042 360 ntBASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 AC012306.2-201ENST00000609350 630 ntBASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PRAMEF17Q5VTA0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 AC099778.1-201ENST00000568593 1911 ntBASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 UNC93B2-201ENST00000285383 730 ntBASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 MESTP1-201ENST00000404287 994 ntBASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 AL445675.2-201ENST00000620291 557 ntBASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 AC097493.4-201ENST00000641197 219 ntBASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PRAMEF17Q5VTA0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 AC004980.1-204ENST00000429707 299 ntBASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 FAM210CP-201ENST00000445714 574 ntBASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 AC011506.1-201ENST00000474329 610 ntBASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.56■□□□□ 0.56
PRAMEF17Q5VTA0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms