Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 KRT18P67-201ENST00000432816 1264 ntBASIC16.99■□□□□ 0.31
LRRK2Q5S007 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 AP000867.3-201ENST00000524675 377 ntBASIC16.99■□□□□ 0.31
LRRK2Q5S007 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRK2Q5S007 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRK2Q5S007 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 AL773604.1-201ENST00000617417 272 ntBASIC16.98■□□□□ 0.31
LRRK2Q5S007 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LRRK2Q5S007 AL121603.2-201ENST00000557373 2117 ntBASIC16.98■□□□□ 0.31
LRRK2Q5S007 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRRK2Q5S007 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRK2Q5S007 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 POLD2P1-201ENST00000511220 997 ntBASIC16.97■□□□□ 0.31
LRRK2Q5S007 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRRK2Q5S007 KRT8P17-201ENST00000453110 1448 ntBASIC16.97■□□□□ 0.31
LRRK2Q5S007 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.97■□□□□ 0.31
LRRK2Q5S007 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 TUBB8P6-201ENST00000436895 1288 ntBASIC16.97■□□□□ 0.31
LRRK2Q5S007 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.97■□□□□ 0.31
LRRK2Q5S007 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.97■□□□□ 0.31
LRRK2Q5S007 AC027796.2-201ENST00000575326 344 ntBASIC16.97■□□□□ 0.31
LRRK2Q5S007 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRRK2Q5S007 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRK2Q5S007 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
LRRK2Q5S007 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.96■□□□□ 0.31
LRRK2Q5S007 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.96■□□□□ 0.31
LRRK2Q5S007 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRRK2Q5S007 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRK2Q5S007 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRK2Q5S007 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRRK2Q5S007 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
LRRK2Q5S007 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRRK2Q5S007 HLA-F-220ENST00000434407 884 ntBASIC16.96■□□□□ 0.3
LRRK2Q5S007 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.96■□□□□ 0.3
LRRK2Q5S007 MIR2861-201ENST00000636310 90 ntBASIC16.96■□□□□ 0.3
LRRK2Q5S007 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.96■□□□□ 0.3
LRRK2Q5S007 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.95■□□□□ 0.3
LRRK2Q5S007 AC064862.7-201ENST00000604520 867 ntBASIC16.95■□□□□ 0.3
LRRK2Q5S007 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 KRT8P41-201ENST00000533985 1514 ntBASIC16.95■□□□□ 0.3
LRRK2Q5S007 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRRK2Q5S007 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms