Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB6CQ53S08 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB6CQ53S08 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB6CQ53S08 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB6CQ53S08 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB6CQ53S08 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB6CQ53S08 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB6CQ53S08 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 KRT18P29-201ENST00000397031 1267 ntBASIC20.31■□□□□ 0.84
RAB6CQ53S08 RPPH1-201ENST00000516869 333 ntBASIC20.31■□□□□ 0.84
RAB6CQ53S08 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 PRKY-204ENST00000533551 1019 ntBASIC20.31■□□□□ 0.84
RAB6CQ53S08 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB6CQ53S08 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB6CQ53S08 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAB6CQ53S08 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAB6CQ53S08 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 AL359736.2-201ENST00000621992 437 ntBASIC20.29■□□□□ 0.84
RAB6CQ53S08 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB6CQ53S08 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAB6CQ53S08 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 KRT8P8-201ENST00000434750 1448 ntBASIC20.28■□□□□ 0.84
RAB6CQ53S08 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 TUBB8P6-201ENST00000436895 1288 ntBASIC20.28■□□□□ 0.84
RAB6CQ53S08 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 AC133681.1-201ENST00000465482 601 ntBASIC20.28■□□□□ 0.84
RAB6CQ53S08 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RAB6CQ53S08 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB6CQ53S08 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6CQ53S08 SDHAP1-207ENST00000440850 2000 ntBASIC20.27■□□□□ 0.84
RAB6CQ53S08 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.27■□□□□ 0.84
RAB6CQ53S08 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6CQ53S08 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6CQ53S08 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6CQ53S08 AL032819.2-201ENST00000624543 2162 ntBASIC20.27■□□□□ 0.84
RAB6CQ53S08 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB6CQ53S08 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RAB6CQ53S08 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms