Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 TEX21P-204ENST00000641479 1693 ntBASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 AP001271.2-201ENST00000624018 1556 ntBASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 AC093525.10-201ENST00000625130 1569 ntBASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ERCC6LQ2NKX8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 AC008406.3-201ENST00000620001 1374 ntBASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 AC141586.3-201ENST00000562166 1838 ntBASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ERCC6LQ2NKX8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.61■□□□□ 0.89
ERCC6LQ2NKX8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 AC126544.1-201ENST00000580842 1059 ntBASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.6■□□□□ 0.89
ERCC6LQ2NKX8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.59■□□□□ 0.89
ERCC6LQ2NKX8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms