Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HIST1H1AQ02539 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 AC022517.1-201ENST00000592429 346 ntBASIC14.9□□□□□ -0.02
HIST1H1AQ02539 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 AC005181.1-201ENST00000604782 1256 ntBASIC14.9□□□□□ -0.02
HIST1H1AQ02539 AL031963.3-201ENST00000606441 850 ntBASIC14.9□□□□□ -0.02
HIST1H1AQ02539 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 OR10C1-204ENST00000622521 1039 ntBASIC14.9□□□□□ -0.02
HIST1H1AQ02539 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 KRT8P20-201ENST00000423953 1409 ntBASIC14.9□□□□□ -0.02
HIST1H1AQ02539 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.9□□□□□ -0.02
HIST1H1AQ02539 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 HLA-G-202ENST00000376815 851 ntBASIC14.89□□□□□ -0.03
HIST1H1AQ02539 HLA-G-203ENST00000376818 1127 ntBASIC14.89□□□□□ -0.03
HIST1H1AQ02539 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HIST1H1AQ02539 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 AC005332.7-201ENST00000614046 2005 ntBASIC14.88□□□□□ -0.03
HIST1H1AQ02539 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 BRWD1-AS2-201ENST00000603064 1028 ntBASIC14.88□□□□□ -0.03
HIST1H1AQ02539 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 AC010980.2-201ENST00000587099 1412 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms