Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL1Q00532 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL1Q00532 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL1Q00532 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDKL1Q00532 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
CDKL1Q00532 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL1Q00532 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 RPS2P52-201ENST00000469610 820 ntBASIC19.18■□□□□ 0.66
CDKL1Q00532 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.18■□□□□ 0.66
CDKL1Q00532 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL1Q00532 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.18■□□□□ 0.66
CDKL1Q00532 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.18■□□□□ 0.66
CDKL1Q00532 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDKL1Q00532 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL1Q00532 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL1Q00532 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.17■□□□□ 0.66
CDKL1Q00532 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.17■□□□□ 0.66
CDKL1Q00532 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.17■□□□□ 0.66
CDKL1Q00532 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL1Q00532 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDKL1Q00532 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL1Q00532 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDKL1Q00532 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL1Q00532 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDKL1Q00532 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.17■□□□□ 0.66
CDKL1Q00532 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CDKL1Q00532 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL1Q00532 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.16■□□□□ 0.66
CDKL1Q00532 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.16■□□□□ 0.66
CDKL1Q00532 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL1Q00532 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.16■□□□□ 0.66
CDKL1Q00532 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CDKL1Q00532 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDKL1Q00532 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDKL1Q00532 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDKL1Q00532 AC005332.7-201ENST00000614046 2005 ntBASIC19.15■□□□□ 0.66
CDKL1Q00532 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
CDKL1Q00532 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL1Q00532 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CDKL1Q00532 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDKL1Q00532 HLA-L-209ENST00000420110 1011 ntBASIC19.15■□□□□ 0.66
CDKL1Q00532 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKL1Q00532 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKL1Q00532 AC120498.8-201ENST00000614275 531 ntBASIC19.15■□□□□ 0.66
CDKL1Q00532 AL121906.2-201ENST00000621597 723 ntBASIC19.15■□□□□ 0.66
CDKL1Q00532 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.15■□□□□ 0.66
CDKL1Q00532 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CDKL1Q00532 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKL1Q00532 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.15■□□□□ 0.66
CDKL1Q00532 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDKL1Q00532 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.14■□□□□ 0.66
CDKL1Q00532 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.14■□□□□ 0.66
CDKL1Q00532 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDKL1Q00532 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
CDKL1Q00532 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CDKL1Q00532 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDKL1Q00532 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDKL1Q00532 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CDKL1Q00532 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CDKL1Q00532 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CDKL1Q00532 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CDKL1Q00532 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDKL1Q00532 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms