Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 BX119927.1-201ENST00000636596 1552 ntBASIC12.3□□□□□ -0.44
RBM3P98179 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
RBM3P98179 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.29□□□□□ -0.44
RBM3P98179 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 NOC2LP2-201ENST00000407594 1944 ntBASIC12.29□□□□□ -0.44
RBM3P98179 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC12.29□□□□□ -0.44
RBM3P98179 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC12.29□□□□□ -0.44
RBM3P98179 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
RBM3P98179 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
RBM3P98179 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC12.29□□□□□ -0.44
RBM3P98179 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
RBM3P98179 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
RBM3P98179 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.29□□□□□ -0.44
RBM3P98179 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 AC011270.2-201ENST00000624293 2550 ntBASIC12.28□□□□□ -0.44
RBM3P98179 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RBM3P98179 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
RBM3P98179 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RBM3P98179 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC12.28□□□□□ -0.44
RBM3P98179 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RBM3P98179 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RBM3P98179 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RBM3P98179 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
RBM3P98179 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 AL117332.1-201ENST00000622628 974 ntBASIC12.28□□□□□ -0.44
RBM3P98179 MIR2861-201ENST00000636310 90 ntBASIC12.28□□□□□ -0.44
RBM3P98179 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.28□□□□□ -0.44
RBM3P98179 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
RBM3P98179 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 DPP3P2-201ENST00000416030 1696 ntBASIC12.28□□□□□ -0.44
RBM3P98179 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RBM3P98179 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RBM3P98179 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC12.28□□□□□ -0.44
RBM3P98179 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.28□□□□□ -0.44
RBM3P98179 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.27□□□□□ -0.44
RBM3P98179 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
RBM3P98179 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
RBM3P98179 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RBM3P98179 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms