Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.56■□□□□ 0.56
GABREP78334 FP700111.2-201ENST00000619190 1892 ntBASIC18.56■□□□□ 0.56
GABREP78334 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.56■□□□□ 0.56
GABREP78334 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
GABREP78334 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
GABREP78334 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.56■□□□□ 0.56
GABREP78334 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.56■□□□□ 0.56
GABREP78334 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.56■□□□□ 0.56
GABREP78334 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.56■□□□□ 0.56
GABREP78334 AC093458.2-201ENST00000623150 629 ntBASIC18.56■□□□□ 0.56
GABREP78334 AL121956.5-201ENST00000625261 221 ntBASIC18.56■□□□□ 0.56
GABREP78334 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
GABREP78334 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABREP78334 IER3-202ENST00000376377 1350 ntBASIC18.55■□□□□ 0.56
GABREP78334 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
GABREP78334 PLK5-205ENST00000642079 1969 ntBASIC18.55■□□□□ 0.56
GABREP78334 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.55■□□□□ 0.56
GABREP78334 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.55■□□□□ 0.56
GABREP78334 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.55■□□□□ 0.56
GABREP78334 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.55■□□□□ 0.56
GABREP78334 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
GABREP78334 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.55■□□□□ 0.56
GABREP78334 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
GABREP78334 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.55■□□□□ 0.56
GABREP78334 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.55■□□□□ 0.56
GABREP78334 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.55■□□□□ 0.56
GABREP78334 AC011558.1-201ENST00000623459 338 ntBASIC18.55■□□□□ 0.56
GABREP78334 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 PHGDH-210ENST00000641115 1638 ntBASIC18.55■□□□□ 0.56
GABREP78334 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GABREP78334 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.55■□□□□ 0.56
GABREP78334 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.55■□□□□ 0.56
GABREP78334 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABREP78334 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.55■□□□□ 0.56
GABREP78334 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.54■□□□□ 0.56
GABREP78334 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.54■□□□□ 0.56
GABREP78334 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.54■□□□□ 0.56
GABREP78334 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GABREP78334 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.54■□□□□ 0.56
GABREP78334 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.54■□□□□ 0.56
GABREP78334 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.54■□□□□ 0.56
GABREP78334 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.54■□□□□ 0.56
GABREP78334 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
GABREP78334 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 AC092338.2-201ENST00000568827 1415 ntBASIC18.54■□□□□ 0.56
GABREP78334 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.54■□□□□ 0.56
GABREP78334 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.54■□□□□ 0.56
GABREP78334 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABREP78334 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
GABREP78334 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABREP78334 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.53■□□□□ 0.56
GABREP78334 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.53■□□□□ 0.56
GABREP78334 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
GABREP78334 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
GABREP78334 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.53■□□□□ 0.56
GABREP78334 TSPY17P-201ENST00000450329 467 ntBASIC18.53■□□□□ 0.56
GABREP78334 HOMER2P1-201ENST00000455653 964 ntBASIC18.53■□□□□ 0.56
GABREP78334 FAM86EP-206ENST00000510506 987 ntBASIC18.53■□□□□ 0.56
GABREP78334 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.53■□□□□ 0.56
GABREP78334 AL512604.3-201ENST00000569583 964 ntBASIC18.53■□□□□ 0.56
GABREP78334 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.53■□□□□ 0.56
GABREP78334 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.53■□□□□ 0.56
GABREP78334 AL031432.5-201ENST00000641059 760 ntBASIC18.53■□□□□ 0.56
GABREP78334 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.53■□□□□ 0.56
GABREP78334 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABREP78334 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABREP78334 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABREP78334 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.52■□□□□ 0.56
GABREP78334 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms