Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.09■□□□□ 0.17
SUPT4H1P63272 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SUPT4H1P63272 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SUPT4H1P63272 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.09■□□□□ 0.17
SUPT4H1P63272 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SUPT4H1P63272 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SUPT4H1P63272 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.09■□□□□ 0.17
SUPT4H1P63272 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT4H1P63272 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT4H1P63272 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT4H1P63272 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT4H1P63272 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT4H1P63272 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.08■□□□□ 0.17
SUPT4H1P63272 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.08■□□□□ 0.17
SUPT4H1P63272 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SUPT4H1P63272 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 AC068880.1-201ENST00000507289 2297 ntBASIC16.08■□□□□ 0.16
SUPT4H1P63272 AP000997.3-201ENST00000623333 2250 ntBASIC16.08■□□□□ 0.16
SUPT4H1P63272 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 AC004854.2-201ENST00000608450 1441 ntBASIC16.08■□□□□ 0.16
SUPT4H1P63272 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SUPT4H1P63272 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SUPT4H1P63272 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 HLA-G-202ENST00000376815 851 ntBASIC16.07■□□□□ 0.16
SUPT4H1P63272 HLA-G-203ENST00000376818 1127 ntBASIC16.07■□□□□ 0.16
SUPT4H1P63272 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 TERF1P2-201ENST00000583350 1212 ntBASIC16.07■□□□□ 0.16
SUPT4H1P63272 AL591742.1-201ENST00000604433 565 ntBASIC16.07■□□□□ 0.16
SUPT4H1P63272 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.07■□□□□ 0.16
SUPT4H1P63272 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.07■□□□□ 0.16
SUPT4H1P63272 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SUPT4H1P63272 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 AL512353.2-201ENST00000448759 1962 ntBASIC16.06■□□□□ 0.16
SUPT4H1P63272 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SUPT4H1P63272 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SUPT4H1P63272 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms