Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN6P56747 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN6P56747 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN6P56747 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN6P56747 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN6P56747 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN6P56747 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.76■□□□□ 0.59
CLDN6P56747 AL023973.1-201ENST00000624619 620 ntBASIC18.76■□□□□ 0.59
CLDN6P56747 AC141257.4-201ENST00000634557 245 ntBASIC18.76■□□□□ 0.59
CLDN6P56747 AC136944.6-201ENST00000634818 245 ntBASIC18.76■□□□□ 0.59
CLDN6P56747 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
CLDN6P56747 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN6P56747 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLDN6P56747 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN6P56747 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN6P56747 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN6P56747 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLDN6P56747 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CLDN6P56747 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLDN6P56747 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN6P56747 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN6P56747 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN6P56747 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN6P56747 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN6P56747 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CLDN6P56747 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN6P56747 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 IER3-202ENST00000376377 1350 ntBASIC18.74■□□□□ 0.59
CLDN6P56747 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN6P56747 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CLDN6P56747 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN6P56747 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN6P56747 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
CLDN6P56747 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN6P56747 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CLDN6P56747 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN6P56747 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.74■□□□□ 0.59
CLDN6P56747 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN6P56747 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN6P56747 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN6P56747 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 AC096733.2-201ENST00000609937 1394 ntBASIC18.73■□□□□ 0.59
CLDN6P56747 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 CCR12P-201ENST00000446203 998 ntBASIC18.73■□□□□ 0.59
CLDN6P56747 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN6P56747 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN6P56747 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN6P56747 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN6P56747 KRT16P6-202ENST00000425692 1426 ntBASIC18.73■□□□□ 0.59
CLDN6P56747 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 AC092338.2-201ENST00000568827 1415 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms