Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CAV3P56539 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.35■□□□□ 0.37
CAV3P56539 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.35■□□□□ 0.37
CAV3P56539 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.35■□□□□ 0.37
CAV3P56539 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.35■□□□□ 0.37
CAV3P56539 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.35■□□□□ 0.37
CAV3P56539 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAV3P56539 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAV3P56539 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.35■□□□□ 0.37
CAV3P56539 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CAV3P56539 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.35■□□□□ 0.37
CAV3P56539 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAV3P56539 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.34■□□□□ 0.37
CAV3P56539 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAV3P56539 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CAV3P56539 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.34■□□□□ 0.37
CAV3P56539 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.34■□□□□ 0.37
CAV3P56539 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.34■□□□□ 0.37
CAV3P56539 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.34■□□□□ 0.37
CAV3P56539 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.34■□□□□ 0.37
CAV3P56539 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.34■□□□□ 0.37
CAV3P56539 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.34■□□□□ 0.37
CAV3P56539 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CAV3P56539 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CAV3P56539 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CAV3P56539 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.33■□□□□ 0.37
CAV3P56539 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CAV3P56539 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.33■□□□□ 0.36
CAV3P56539 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.33■□□□□ 0.36
CAV3P56539 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CAV3P56539 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CAV3P56539 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CAV3P56539 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CAV3P56539 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.33■□□□□ 0.36
CAV3P56539 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CAV3P56539 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.32■□□□□ 0.36
CAV3P56539 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.32■□□□□ 0.36
CAV3P56539 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAV3P56539 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CAV3P56539 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CAV3P56539 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.32■□□□□ 0.36
CAV3P56539 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms